*** Brainpipe Parameters
smooth=1
smoothing array=2,2,2
shrink=1
normalize=1
group 1=[string]
group 2=[string]
statistical test=0
# permutations=1000
p-vals for pixel clusters=0.0001, 0.00001, 0.000001
min cluster size=3
normalize file=
original images=[path to image volumes: (.nii/.nii.gz/.tif)]
rank transform=1
calc Pt ratio=0
output to=[folder to save output]
include matching=-01
exclude matching=Warp
# subset=
affine folder=
iwarp regions folder=
experimental=0
